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HaploPainter
A unique utility designed for drawing pedigrees with complex haplotypes....
SNPYGoat
Rapidly identify several goat Y-chromosomal haplotypes...
HapEvolution
Detects gene-gene interactions from case-control haplotype data...
PPH
A program for inferring haplotypes from genotypes...
analysis haplotype extended haplotypes haplotype analysis generate interacting genotypes
Collapse
Describing haplotypes from sequence alignments...
metadata describing codon sequence sequence rythmic sequence phoneme sequence
SATlotyper
Haplotype inference from unphased SNP data in heterozygous polyploids based on SAT...
inference engine Fuzzy inference system mine SNP site analyze SNP site haplotype estimation
HAPMIXMAP
HAPMIXMAP is a program for modelling extended haplotypes in genetic association studies...
Manage Association gene dafault image association edit program association haplotype
Haploview
Haplotype analysis made easy....
analysis Analyze Test haplotype estimation estimate haplotype
TreeScan
Genotype-phenotype associations from haplotype trees...
scan evolution genotype plot genotype data view genotype data
Haplowser
Browse haplotypes and their annotations throughout whole genomes...