exploRase

R tool for analyzing biological data
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exploRase Ranking & Summary

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  • Rating:
  • License:
  • GPL
  • Publisher Name:
  • Metabolic Network Exchange
  • Operating Systems:
  • Windows All
  • File Size:
  • 1.8 MB

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exploRase Description

exploRase was specially designed as an Open Source R-based instrument for the exploratory multivariate analysis of Systems Biology data. It provides a GUI on top of the analysis functionality provided by R and the Bioconductor project. exploRase is designed to be accessible to biologists analyzing omics data in the context of metabolic and regulatory networks. Main features: Provides a biologist-accessible GUI to R analysis functionality, such as distance measures, clustering, pattern-finding, and modeling. Integrates the analysis with interactive graphics, using GGobi. Handles transcriptomic, metabolomic, and proteomic data. Simplifies the loading of experimental data into R and GGobi. Supports the storage of lists of "interesting" entities for future sessions. Links sortable tables of entity metadata to GGobi plots by color coding. Provides automatic access to AtGeneSearch, the web interface to MetNetDB. Saves calculated statistics.


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