CodonCode Aligner Sequence Assembler User-friendly software for DNA sequence assembly and alignment. Features include end clipping, sequence assembly, alignment to reference sequences, contig editing, mutation detection, contig alignment
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CodonCode Aligner Sequence Assembler Ranking & Summary

CodonCode Aligner Sequence Assembler Tags

Photo Sequence implement ANSI sequence sequence diagram designer visual assembly assembly music sequence align sequence translate mRNA sequence codon sequence sequence assembly collection SQL Assembly Generator Generate SQL Assembly SQL Assembly remove assembly Biztalk assembly number sequence rythmic sequence image sequence sequence creator sequence button phoneme sequence rhythmic sequence sequence generator sequence editing DNA sequence Sound Sequence note sequence edit sequence Video Sequence Sequence Reader Calculate Sequence insert sequence header sequence header fibonacci sequence Capture YUV Sequence graphic mutation document assembly text alignment column alignment folder sequence arithmetic sequence assembly learning protein sequence generate sequence integer sequence HLA sequence mutation Assembly Wrapper objects assembly key sequence associator biosystem sequence key sequence contig menu add contig contig defrag Contig ANSI escape sequence Assembly Info inline assembly Assembly analyzer Assembly Explorer sequence diagram creator sequence diagram x86 assembly language ANSI control sequence read alignment formats graphical alignment editor write alignment formats alignment assembly debugger genetic sequence group sequence convert DNA sequence display image sequence 3D photo alignment create alignment represent C++ sequence view C++ sequence Text Sequence bass sequence sequence audio Excel assembly document alignment sequence diversity CRLF sequence Partial Ansi Sequence support Assembly Obfuscator Assembly Encryption DeObfuscate Assembly Assembly Cache test assembly assembly loader load assembly Global Assembly Cache sequence diagram generator write sequence diagram assembly editor write assembly extract sequence sequence extraction pack assembly Create Sequence Robot Sequence Analyze Assembly assembly RNA sequence contig edit detect mutation Browse Assembly Assembly Finder Assembly Checker Check Assembly Assembly Version Assembly Version Info Assembly Name GAC assembly name GAC assembly version GAC assembly grabber metagenomic sequence database rename sequence peptide sequence protein consensus sequence consensus sequence biological sequence clean sequence analyze sequence alignment sequence alignment analyzer view sequence alignment read DNA sequence DNA sequence reader analyze DNA sequence split sequence sequence splitter analyze sequence optical assembly analysis Calculate Fibonacci sequence multiple sequence alignment nucleotide sequence nucleotide sequence manager Sequence viewer edit DNA sequence DNA sequence editor view DNA sequence DNA sequence analysis sequence manager sequence editor view sequence assembly alignment visualizeation manipulate alignment alignment manipulation create sequence alignment sequence alignment creator make sequence alignment alignment data analysis sequence alignment data analyze alignment data DNA sequence analyzer assembly code align DNA sequence compare DNA sequence amino acid sequence sequence annotation DNA alignment DNA profile alignment matching sequence cromatrogram sequence DLL assembly component assembly test sequence manager test sequence assembly weave Assembly Verifier Verify Assembly assembly dependency assembly METS document Bits Sequence Assembly syntax Assembly Installation assembly converter obfuscate assembly Sign Assembly Unsigned Assembly tabla sequence short loop animated sequence interactive sequence mining sequence assembly global sequence alignment sequence transpose reduction sequence assembly viewer escape sequence compare assembly assembly comparator execute sequence z80 assembly development Assembly Workflow Assembly Information model SCA assembly SCA assembly Assembly Visualizer fasta sequence database federate bio-sequence bio-sequence user detection Sequence alignment viewer Sequence alignment Sequence feature sequence alignment algorithm alignment accuracy aliquot sequence recursive sequence Micro Assembly Language phonematic sequence Assembly to XMI Assembly to UML Protein Alignment bayesian alignment sequence analyzer mammalian genomic sequence Validate Assembly assembly compiler compile assembly Assembly To Visio Assembly Command Explore Assembly Assembly IDE query sequence divide sequence image sequence combiner create image sequence multiple alignment editor multiple alignment alignment editor aligh sequence sequence comparison DNA Sequence Manipulation Sequence Shader Alignment Method sequence report cDNA sequence Local Alignment Search Sequence Similarity aligned DNA sequence data view biologic sequence biologic sequence viewer predict singal sequence target assembly Genomic DNA sequence score structure alignment rank structure alignment Smith-Waterman alignment sequence visualization view sequence compress DNA sequence DNA sequence compression encode DNA sequence DNA sequence compressor sequence formatting function sequence mapper map sequence view chromosome sequence chromosome sequence viewer sequence variation database sequence DNA sequence data analyze 16S rRNA gene sequence gene sequence viewer nucleic acid sequence display alignment create mutation spliced alignment sequence alignments viewer analyze sequence alignments DNA sequence alignment sequence to haplotype assembly unpacker assembly updater sequence tester Sequence Maker Execute Assembly pairwise alignment analysis analyze pairwise alignment view alignment file display alignment file sequence alignment analysis Satellite dish alignment submit DDBJ sequence database analyze DNA alignment sequence statistics find alignment gap locate alignment gap analyze DNA sequence data protein sequences alignment 3D-structure alignment analyze sequence alingment compare sequence sequence-structure alignment analyse DNA sequence biological sequence editor sequence GUI Gene Sequence scan sequence recognize sequence alignment analysis sequence constructor construct sequence Sequence Evolution Sequence Simulator frequency mutation molecular sequence sequence searcher sequence fragment simulate mutation generate breath hold sequence NCBI BLAST alignment analyze sequence file protein sequence alignment study Direct Sequence process identify alignment error analyze gnome sequence Gene Sequence Name DNA sequence visualization classify sequence RNA Alignment nucleotide mutation sequence mining analyze multiple sequence DNA sequence evolution vector sequence DNA repeats detection genes mutation Assembly Protection assembly obfuscation numerical sequence Assembly Resource cross-contig spectra assembly description clipping e-motion deluxe assembly line re SolidWorks Assembly assembly language page alignment

CodonCode Aligner Sequence Assembler Description

Size: 34.18 MB License: Commercial OS: Mac OS, Windows Price: $720 Buy full version Publisher: CodonCode Corporation Updated: 2 Nov 2010 Downloads: 83 (1 last week) CodonCode Aligner is user-friendly software for DNA sequence assembly, alignment, contig editing, and mutation detection. In addition to features common in sequence assembly programs like end clipping, alignments to reference sequences, cDNA to genomic DNA alignment, and exporting, CodonCode Aligner offers many unique features not found in other software. Advanced CodonCode Aligner features include: - Assemble by name: build hundreds of contigs in seconds, based on sample names - Accurate consensus sequences based on sequence qualities eliminate the need to edit trivial discrepancies - Contigs of contigs: align contigs to each other with ClustalW, and go back to the underlying traces with a simple double-click - Automate with one-step processing and scripts - Sensitive mutation analysis with unique tools for analyzing heterozygous insertions and deletions - Use leading tools like Clustal, MUSCLE, Phred & Phrap within CodonCode Aligner - Get a better look at your ABI sequences with CodonCode Aligner's trace sharpening - Look at differences with the difference table and zooming in contigs - Build Neighbor-Joining trees to sort your samples by differences CodonCode Aligner is easy to learn and use, yet powerful and highly customizable. It includes extensive, context-sensitive help with "how to" instructions and explanations about the algorithms used. CodonCode Aligner is widely used in phylogenetics, evolution research, biogeography, mutation detection, and other biomedical research areas. The download is a trial version that is fully functional for 30 days. It can be converted into a full version by purchasing a license. Licenses for CodonCode Aligner are substantially less expensive than licenses for comparable software packages. "Floating" licenses are available at no additional cost, and can be shared between Windows and Mac OS X.

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